TimeXNet Web - Identify active gene networks and pathways using time-course biological data

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KEGG Pathway Enrichment

Job Name:

TimeXNet Sample

Current Gene List:

Input Gene List

Background List:

Submitted Network

141 chart records

Note: Only the top 1000 records are shown here

Category	Term	Count	%	P-value	Benjamini
KEGG_PATHWAY	mmu05164:Influenza A	89	7.2	1.2e-33	3.2e-31
KEGG_PATHWAY	mmu05142:Chagas disease (American trypanosomiasis)	73	5.9	1.7e-33	2.1e-31
KEGG_PATHWAY	mmu04380:Osteoclast differentiation	75	6.0	1.3e-32	1.1e-30
KEGG_PATHWAY	mmu04668:TNF signaling pathway	72	5.8	2.5e-31	1.6e-29
KEGG_PATHWAY	mmu04630:Jak-STAT signaling pathway	80	6.4	3.6e-30	1.9e-28
KEGG_PATHWAY	mmu05169:Epstein-Barr virus infection	96	7.7	5.6e-30	2.4e-28
KEGG_PATHWAY	mmu04620:Toll-like receptor signaling pathway	66	5.3	9.5e-30	3.5e-28
KEGG_PATHWAY	mmu05161:Hepatitis B	78	6.3	1.2e-28	3.8e-27
KEGG_PATHWAY	mmu04722:Neurotrophin signaling pathway	72	5.8	4.2e-28	1.2e-26
KEGG_PATHWAY	mmu05145:Toxoplasmosis	66	5.3	9.4e-28	2.4e-26
KEGG_PATHWAY	mmu05200:Pathways in cancer	150	12.1	1.5e-27	3.5e-26
KEGG_PATHWAY	mmu05160:Hepatitis C	73	5.9	3.5e-25	7.4e-24
KEGG_PATHWAY	mmu05162:Measles	73	5.9	7.7e-25	1.5e-23
KEGG_PATHWAY	mmu04660:T cell receptor signaling pathway	64	5.1	5.1e-24	9.4e-23
KEGG_PATHWAY	mmu05220:Chronic myeloid leukemia	51	4.1	7.7e-24	1.3e-22
KEGG_PATHWAY	mmu05203:Viral carcinogenesis	89	7.2	1.1e-23	1.8e-22
KEGG_PATHWAY	mmu04012:ErbB signaling pathway	57	4.6	2.0e-23	3.0e-22
KEGG_PATHWAY	mmu04510:Focal adhesion	89	7.2	1.1e-22	1.5e-21
KEGG_PATHWAY	mmu05168:Herpes simplex infection	76	6.1	2.7e-22	3.7e-21
KEGG_PATHWAY	mmu04010:MAPK signaling pathway	102	8.2	3.3e-22	4.2e-21
KEGG_PATHWAY	mmu04917:Prolactin signaling pathway	50	4.0	3.5e-22	4.3e-21
KEGG_PATHWAY	mmu04062:Chemokine signaling pathway	84	6.8	7.4e-22	8.7e-21
KEGG_PATHWAY	mmu04064:NF-kappa B signaling pathway	55	4.4	2.0e-21	2.3e-20
KEGG_PATHWAY	mmu05205:Proteoglycans in cancer	92	7.4	2.8e-21	3.0e-20
KEGG_PATHWAY	mmu05166:HTLV-I infection	103	8.3	4.8e-21	4.9e-20
KEGG_PATHWAY	mmu04650:Natural killer cell mediated cytotoxicity	57	4.6	6.1e-21	6.0e-20
KEGG_PATHWAY	mmu05140:Leishmaniasis	40	3.2	1.4e-20	1.3e-19
KEGG_PATHWAY	mmu05133:Pertussis	47	3.8	2.1e-20	1.9e-19
KEGG_PATHWAY	mmu04664:Fc epsilon RI signaling pathway	46	3.7	2.7e-20	2.4e-19
KEGG_PATHWAY	mmu05212:Pancreatic cancer	45	3.6	3.3e-20	2.8e-19
KEGG_PATHWAY	mmu04015:Rap1 signaling pathway	88	7.1	3.5e-20	2.9e-19
KEGG_PATHWAY	mmu05215:Prostate cancer	51	4.1	1.3e-19	1.1e-18
KEGG_PATHWAY	mmu04151:PI3K-Akt signaling pathway	120	9.7	2.6e-19	2.0e-18
KEGG_PATHWAY	mmu05152:Tuberculosis	75	6.0	5.9e-19	4.5e-18
KEGG_PATHWAY	mmu04068:FoxO signaling pathway	67	5.4	1.7e-18	1.2e-17
KEGG_PATHWAY	mmu05223:Non-small cell lung cancer	40	3.2	3.0e-18	2.1e-17
KEGG_PATHWAY	mmu04071:Sphingolipid signaling pathway	57	4.6	1.4e-17	9.7e-17
KEGG_PATHWAY	mmu04210:Apoptosis	42	3.4	1.7e-17	1.2e-16
KEGG_PATHWAY	mmu05214:Glioma	41	3.3	2.3e-17	1.5e-16
KEGG_PATHWAY	mmu04662:B cell receptor signaling pathway	42	3.4	1.3e-16	6.7e-16
KEGG_PATHWAY	mmu04060:Cytokine-cytokine receptor interaction	87	7.0	5.0e-16	2.8e-15
KEGG_PATHWAY	mmu04370:VEGF signaling pathway	39	3.1	9.8e-16	6.1e-15
KEGG_PATHWAY	mmu04014:Ras signaling pathway	84	6.8	1.1e-15	6.7e-15
KEGG_PATHWAY	mmu04915:Estrogen signaling pathway	50	4.0	3.1e-15	1.8e-14
KEGG_PATHWAY	mmu04910:Insulin signaling pathway	62	5.0	6.3e-15	3.6e-14
KEGG_PATHWAY	mmu04622:RIG-I-like receptor signaling pathway	39	3.1	6.4e-15	3.5e-14
KEGG_PATHWAY	mmu05210:Colorectal cancer	39	3.1	6.4e-15	3.5e-14
KEGG_PATHWAY	mmu04621:NOD-like receptor signaling pathway	35	2.8	8.7e-15	4.7e-14
KEGG_PATHWAY	mmu05222:Small cell lung cancer	46	3.7	9.3e-15	4.9e-14
KEGG_PATHWAY	mmu04611:Platelet activation	55	4.4	1.9e-13	1.0e-12
KEGG_PATHWAY	mmu04919:Thyroid hormone signaling pathway	51	4.1	2.6e-13	1.4e-12
KEGG_PATHWAY	mmu05221:Acute myeloid leukemia	33	2.7	3.2e-13	1.6e-12
KEGG_PATHWAY	mmu05213:Endometrial cancer	32	2.6	1.1e-12	5.7e-12
KEGG_PATHWAY	mmu05206:MicroRNAs in cancer	57	4.6	2.2e-12	1.1e-11
KEGG_PATHWAY	mmu04914:Progesterone-mediated oocyte maturation	43	3.5	3.7e-12	1.8e-11
KEGG_PATHWAY	mmu04912:GnRH signaling pathway	41	3.3	5.1e-12	2.4e-11
KEGG_PATHWAY	mmu05231:Choline metabolism in cancer	43	3.5	1.2e-11	5.5e-11
KEGG_PATHWAY	mmu04670:Leukocyte transendothelial migration	52	4.2	1.6e-11	7.0e-11
KEGG_PATHWAY	mmu04066:HIF-1 signaling pathway	46	3.7	4.2e-11	1.8e-10
KEGG_PATHWAY	mmu04923:Regulation of lipolysis in adipocytes	31	2.5	1.1e-10	4.9e-10
KEGG_PATHWAY	mmu05202:Transcriptional misregulation in cancer	53	4.3	1.3e-10	5.6e-10
KEGG_PATHWAY	mmu05132:Salmonella infection	39	3.1	1.4e-10	6.0e-10
KEGG_PATHWAY	mmu05321:Inflammatory bowel disease (IBD)	29	2.3	2.6e-10	1.1e-9
KEGG_PATHWAY	mmu04930:Type II diabetes mellitus	28	2.3	3.9e-10	1.6e-9
KEGG_PATHWAY	mmu05146:Amoebiasis	43	3.5	7.6e-10	3.0e-9
KEGG_PATHWAY	mmu04931:Insulin resistance	44	3.5	2.8e-9	1.1e-8
KEGG_PATHWAY	mmu05211:Renal cell carcinoma	31	2.5	6.3e-9	2.4e-8
KEGG_PATHWAY	mmu05100:Bacterial invasion of epithelial cells	37	3.0	8.5e-9	3.2e-8
KEGG_PATHWAY	mmu05219:Bladder cancer	23	1.9	1.4e-8	5.5e-8
KEGG_PATHWAY	mmu04666:Fc gamma R-mediated phagocytosis	37	3.0	2.2e-8	8.0e-8
KEGG_PATHWAY	mmu05134:Legionellosis	28	2.3	2.5e-8	9.3e-8
KEGG_PATHWAY	mmu04810:Regulation of actin cytoskeleton	66	5.3	6.8e-8	2.5e-7
KEGG_PATHWAY	mmu04024:cAMP signaling pathway	60	4.8	8.2e-8	2.9e-7
KEGG_PATHWAY	mmu04750:Inflammatory mediator regulation of TRP channels	40	3.2	1.4e-7	4.8e-7
KEGG_PATHWAY	mmu04640:Hematopoietic cell lineage	33	2.7	2.3e-7	7.9e-7
KEGG_PATHWAY	mmu05218:Melanoma	31	2.5	2.4e-7	8.3e-7
KEGG_PATHWAY	mmu04520:Adherens junction	30	2.4	2.5e-7	8.3e-7
KEGG_PATHWAY	mmu04261:Adrenergic signaling in cardiomyocytes	49	3.9	4.4e-7	1.5e-6
KEGG_PATHWAY	mmu04932:Non-alcoholic fatty liver disease (NAFLD)	50	4.0	5.0e-7	1.6e-6
KEGG_PATHWAY	mmu04540:Gap junction	33	2.7	5.3e-7	1.7e-6
KEGG_PATHWAY	mmu05416:Viral myocarditis	24	1.9	5.4e-7	1.7e-6
KEGG_PATHWAY	mmu04960:Aldosterone-regulated sodium reabsorption	21	1.7	6.4e-7	2.0e-6
KEGG_PATHWAY	mmu05143:African trypanosomiasis	17	1.4	1.8e-6	5.7e-6
KEGG_PATHWAY	mmu05230:Central carbon metabolism in cancer	27	2.2	2.6e-6	8.0e-6
KEGG_PATHWAY	mmu04612:Antigen processing and presentation	23	1.9	2.6e-6	8.0e-6
KEGG_PATHWAY	mmu04623:Cytosolic DNA-sensing pathway	25	2.0	2.7e-6	8.2e-6
KEGG_PATHWAY	mmu05144:Malaria	20	1.6	3.6e-6	1.1e-5
KEGG_PATHWAY	mmu04115:p53 signaling pathway	26	2.1	9.8e-6	2.9e-5
KEGG_PATHWAY	mmu04921:Oxytocin signaling pathway	47	3.8	1.1e-5	3.2e-5
KEGG_PATHWAY	mmu04920:Adipocytokine signaling pathway	29	2.3	1.1e-5	3.2e-5
KEGG_PATHWAY	mmu05332:Graft-versus-host disease	14	1.1	1.4e-5	3.9e-5
KEGG_PATHWAY	mmu04022:cGMP-PKG signaling pathway	47	3.8	1.7e-5	4.9e-5
KEGG_PATHWAY	mmu04110:Cell cycle	42	3.4	2.4e-5	6.8e-5
KEGG_PATHWAY	mmu04940:Type I diabetes mellitus	17	1.4	2.7e-5	7.4e-5
KEGG_PATHWAY	mmu04730:Long-term depression	23	1.9	2.7e-5	7.4e-5
KEGG_PATHWAY	mmu05330:Allograft rejection	15	1.2	3.7e-5	0.0001
KEGG_PATHWAY	mmu04550:Signaling pathways regulating pluripotency of stem cells	43	3.5	5.3e-5	0.00014
KEGG_PATHWAY	mmu05014:Amyotrophic lateral sclerosis (ALS)	22	1.8	6.5e-5	0.00017
KEGG_PATHWAY	mmu04152:AMPK signaling pathway	40	3.2	7.0e-5	0.00018
KEGG_PATHWAY	mmu04728:Dopaminergic synapse	40	3.2	7.0e-5	0.00018
KEGG_PATHWAY	mmu05323:Rheumatoid arthritis	25	2.0	0.0001	0.00026
KEGG_PATHWAY	mmu04150:mTOR signaling pathway	23	1.9	0.00013	0.00032
KEGG_PATHWAY	mmu04144:Endocytosis	63	5.1	0.00013	0.00033
KEGG_PATHWAY	mmu03050:Proteasome	19	1.5	0.00018	0.00046
KEGG_PATHWAY	mmu04360:Axon guidance	38	3.1	0.00019	0.00047
KEGG_PATHWAY	mmu05340:Primary immunodeficiency	17	1.4	0.00021	0.0005
KEGG_PATHWAY	mmu05020:Prion diseases	15	1.2	0.00021	0.00051
KEGG_PATHWAY	mmu05216:Thyroid cancer	13	1.0	0.00032	0.00078
KEGG_PATHWAY	mmu04725:Cholinergic synapse	33	2.7	0.00035	0.00084
KEGG_PATHWAY	mmu05030:Cocaine addiction	18	1.4	0.00044	0.001
KEGG_PATHWAY	mmu04530:Tight junction	38	3.1	0.00044	0.001
KEGG_PATHWAY	mmu04120:Ubiquitin mediated proteolysis	38	3.1	0.00054	0.0013
KEGG_PATHWAY	mmu05034:Alcoholism	38	3.1	0.00054	0.0013
KEGG_PATHWAY	mmu04114:Oocyte meiosis	33	2.7	0.00055	0.0013
KEGG_PATHWAY	mmu04350:TGF-beta signaling pathway	28	2.3	0.001	0.0023
KEGG_PATHWAY	mmu04720:Long-term potentiation	21	1.7	0.0019	0.0044
KEGG_PATHWAY	mmu05414:Dilated cardiomyopathy	25	2.0	0.0021	0.0047
KEGG_PATHWAY	mmu05150:Staphylococcus aureus infection	16	1.3	0.0023	0.005
KEGG_PATHWAY	mmu04145:Phagosome	37	3.0	0.0023	0.005
KEGG_PATHWAY	mmu04672:Intestinal immune network for IgA production	14	1.1	0.0057	0.012
KEGG_PATHWAY	mmu05031:Amphetamine addiction	19	1.5	0.0058	0.012
KEGG_PATHWAY	mmu04270:Vascular smooth muscle contraction	29	2.3	0.0062	0.013
KEGG_PATHWAY	mmu04925:Aldosterone synthesis and secretion	21	1.7	0.0065	0.014
KEGG_PATHWAY	mmu05412:Arrhythmogenic right ventricular cardiomyopathy (ARVC)	21	1.7	0.008	0.017
KEGG_PATHWAY	mmu04141:Protein processing in endoplasmic reticulum	41	3.3	0.0081	0.017
KEGG_PATHWAY	mmu04320:Dorso-ventral axis formation	10	0.8	0.0096	0.02
KEGG_PATHWAY	mmu04973:Carbohydrate digestion and absorption	13	1.0	0.021	0.042
KEGG_PATHWAY	mmu04390:Hippo signaling pathway	37	3.0	0.021	0.043
KEGG_PATHWAY	mmu04970:Salivary secretion	17	1.4	0.024	0.048
KEGG_PATHWAY	mmu05322:Systemic lupus erythematosus	21	1.7	0.029	0.057
KEGG_PATHWAY	mmu04713:Circadian entrainment	23	1.9	0.032	0.063
KEGG_PATHWAY	mmu04916:Melanogenesis	25	2.0	0.04	0.078
KEGG_PATHWAY	mmu05410:Hypertrophic cardiomyopathy (HCM)	20	1.6	0.046	0.088
KEGG_PATHWAY	mmu04924:Renin secretion	15	1.2	0.05	0.095
KEGG_PATHWAY	mmu04918:Thyroid hormone synthesis	16	1.3	0.058	0.11
KEGG_PATHWAY	mmu05320:Autoimmune thyroid disease	11	0.9	0.059	0.11
KEGG_PATHWAY	mmu04514:Cell adhesion molecules (CAMs)	28	2.3	0.064	0.12
KEGG_PATHWAY	mmu04310:Wnt signaling pathway	31	2.5	0.07	0.13
KEGG_PATHWAY	mmu04971:Gastric acid secretion	17	1.4	0.076	0.14
KEGG_PATHWAY	mmu04330:Notch signaling pathway	13	1.0	0.085	0.15
KEGG_PATHWAY	mmu04512:ECM-receptor interaction	19	1.5	0.092	0.16