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TimeXNet Web - Identify active gene networks and pathways using time-course biological data

Installation

TimeXNet is implemented using the Java Development Kit (JDK) 1.7 and can be run using the Java Runtime Environment (JRE) 7 on any OS.


To install:

  1. Download the zip file.
  2. Unzip and copy the contents to a suitable working directory.
  3. Install the GNU Linear Programming Kit.

Dependencies

TimeXNet requires the following to be installed on the user’s machine:

  1. The Java Runtime Environment 7 (JRE7) - available for all OS platforms.
  2. The GNU Linear Programming Kit (GLPK) - Linux, Windows, Mac.